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How Life Works

From Slow Like Wiki

Prologue

  • Looking to the genome for an account of ho life works is rather like looking to a dictionary to understand how literature works.
  • The new picture dispels the long-standing idea that living systems must be regarded as machines.
  • Living entities are generators of meaning. They mine their environment (including their own bodies) for things that have meaning for them: moisture, nutrients, warmth. It is not sentimental but simply following the same logic to say that, for we human organisms, another of those meaningful things is love.
  • Life is a hierarchical process, and each level has its own rules and principles: there are those that apply to genes, and to proteins, to cells and tissues and body modules such as the immune system and the nervous system. All are essential: none can claim primacy.
  • Genes don't generally specify unique outcomes at the level of cells and organisms.
  • Recurring themes and principles:
    • Complexity and Redundancy
    • Modularity
    • Robustness
    • Canalization
    • Multilevel, Multidirectional, and Hierarchical Organization
    • Combinatorial Logic
    • Self-Organization in Dynamic Landscapes
    • Agency and Purpose
    • Causal Power

1. The End of the Machine: A New View of Life

  • Living things are, you could say, those entities capable of attributing value in their environment, and thereby finding a point to the universe.
  • Meaning-generators are successful entities in a Darwinian world. Making meaning is a great way of staying alive and propagating - so much so, indeed, that it's probably the only way to be alive at all.
  • The point is that we need to acknowledge what evolution does to matter: it gives matter goals and functions. That is what makes evolved life so special.

2. Genes: What DNA Really Does

3. RNA and Transcription: Reading the Message

4. Proteins: Structure and Unstructure

5. Networks: The Webs That Make Us

6. Cells: Decisions, Decisions

7. Tissues: How to Build, When to Stop

8. Bodies: Uncovering the Pattern

9. Agency: How Life Gets Goals and Purpose

10. Troubleshooting: Rethinking Medicine

11. Making and Hacking: Redesigning Life

Epilogue